I would tar up all the files that were applicable to your production environment, are you still running derby or mysql?
To backup the AwareIM instance i would issue the following command.
tar cf /path/of/awareIM backup.tar.gz
(gathers up all the files and compresses it into a neat archive)
To backup a mysql database i would issue the following command.
mysqldump -u root -p BASDB > BASDB.sql
mysqldump -u root -p BASDBTEST > BASDBTEST.sql
(Dumps out the entire SQL structure and data. This command will need a password for the admin user.)
then start the upgrade procedure.
Pete